Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVLLLGPPGAGKGTQAVKLAEKLGIPQISTGELFRRNIEEGTKLGVEAKRYLDAGDLVPSDLTNELVDDRLNNPDAANGFILDGYPRSVEQAKALHEMLERRGTDIDAVLEFRVSEEVLLERLKGRG-------------------------------RADDTDDVILNRMKVYRDETAPLLEYYRDQLKTVDAVGTMDEVFARALRALGK
4K46 Chain:A ((1-182))
MRIILLGAPGAGKGTQAQFIMAKFGIPQISTGDMLRAAIKAGTELGKQAKSVIDAGQLVSDDIILGLVKERIAQDDCAKGFLLDGFPRTIPQADGLKEV----GVVVDYVIEFDVADSVIVERMAGRRAHLASGRTYHNVYNPPKVEGKDDVTGEDLVIREDDKEETVLARLGVYHNQTAPLIAYY--------------------------
General information:
TITO was launched using:
RESULT:
Template:
4K46.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46372 for 1124 contacts (-41.3/contact) +
2D Compatibility (PS) -16821 + (NN) -13261 + (LL) 2684
1D Compatibility (HY) -17200 + (ID) 3850
Total energy: -94820.0 ( -84.36 by residue)
QMean score : 0.622
(partial model without unconserved sides chains):
PDB file :
Tito_4K46.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4K46-query.scw
PDB file :
Tito_Scwrl_4K46.pdb
: