Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTALDWRSALTADEQRSVRALVTATTAVDGVAPVG-EQVLRELGQQ-RTEHLLVAGSRPGGPIIGYLNLSPP---RGAGGAMAELVVHPQSRRRGIGTAMARAALAKTA----GRNQFWAH------------GTLDPARATASALGLVGVRELI-QMRRPLRDIPEP------TIPDGVVIRTYAGTSDDAELLRVNNAAFAGHPEQGGWTAVQLAERRGEAWFDPDGLILAFGDSPRERPGRLLGFHWTKVHP----------------DHPGLGEVYVLGVDPAAQRRGLGQMLTSIGIVSLARRLGGRKTLDPAVEPAVLLYVESDNVAAVRTYQSLGFTTYSVDTAYALAGTDN |
| 4ZM6 Chain:A ((547-857)) | -----------DDDLDHVTAMWDDIFGKDW--PLRKDKINLGLQRAKLQKHKVARD--SQGKIVGFVATQIVVVDNKKHGQLMLLMVSPSYQGKGVGTLLHDAALEHFREQGADCIKLGSTYPRFFPGVPDDDAQSRKAQAFFSKKGWRMDDNLVHDLIGDLQDYKVPDKIQARMLKEKIWFGRIKPS-ETWELYAFQQRNFPH------W-LSTYQHHVELG--DYQDLIVARQDD---ENGRVIASLILNTTHVSHEYRSDLIWTDDKLFGERSGGMACVGVAQEERGRGIGIGIVAHANWLLK-QRG---------VTKSYVDWV----ELLDFYSRVGYKTWRSYRLGH------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ZM6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -95465 for 1938 contacts (-49.3/contact) +
2D Compatibility (PS) -29013 + (NN) -15546 + (LL) 2164
1D Compatibility (HY) -13600 + (ID) 2500
Total energy: -153960.0 ( -79.44 by residue)
QMean score : 0.462
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