Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMARASGASDYRSGELSHQDERGAAHMVDITEKATTKRTAVAAGILRTSAQVVALISTGGLPKGDALATARVAGIMAAKRTSDLIPLCHQLALTGVD--VDFTVGQLDIEITATVRSTDRTGVEMEALTAVSVAALTLYDMIKAVDPGALIDDIRVLHKEGGRRGTWTRR
3JQJ Chain:E ((9-155))---------------------GRPRMVDVTEKPETFRTATAEAFVELTEEALSALEKGGVGKGDPLVVAQLAGILAAKKTADLIPLCHPLPLTGVEVRVELLKAEKRVRIEATVKTKAETGVEMEAMTACAVAALTVYDMLKAASKGLVISQVRLLHKAGGKSGEWRR-


General information:
TITO was launched using:
RESULT:

Template: 3JQJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -78244 for 1136 contacts (-68.9/contact) +
2D Compatibility (PS) -15563 + (NN) -7187 + (LL) 1072
1D Compatibility (HY) -13600 + (ID) 3650
Total energy: -117172.0 ( -103.14 by residue)
QMean score : 0.417

(partial model without unconserved sides chains):
PDB file : Tito_3JQJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3JQJ-query.scw
PDB file : Tito_Scwrl_3JQJ.pdb: