Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGVSEAERRGHRKLVRFQARRAIGPIRPTSAAWDRDF-------DPAGKRIAVVGTDAAAAHYISRLSESAASVTVFTQAPRRVVTGVPLW-------------TT------------------------------R------------------------------AKRWL----RR---------RTGA--------------------EHPAVAWAT---AAIDALTSSGIRTSDGVEHPVDAIIYGTGFAIADQ-VGDQTLVGAGGVTIRQAWDDGMEPYLGVAVHGFPNYFFITGPDT-----------AAQARCVVECMKLMERTASRRIEVRRSSQQVFNERAQLKPAQPHRQTGGLEAFDLSSAATEDDQTYDGAATLTLAGARFRVRVRLTGHLDPIDGNYHWQGTVFDSLPETSLTHARAATLTIGGRSAPARITEQTPWGTHSVAGVGPPPYARSGPASATT |
| 3UOX Chain:A ((138-496)) | -FLISATGPLSA---PDIKGIDSFKGESFHSSRWPTDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNWCTPLGNSPMSKEKMDSLRNRYPTILEYVKSTDTAFPYHRDPRKGTDVSESERDAFFEELYRQPGYGIWLSGFRDLLLNKESNKFLADFVAKKIRQRVKDPVVAEKLIPKDHPFGAKRVPMETNYYETYNRDNVHLVDIREAPIQEVTPEGIKTADA-AYDLDVIIYATGFDAVTGSLDRIDIRGKDNVRLIDAWAEGPSTYLGLQARGFPNFFTLVGPHNGSTFCNVGVCGGLQAEWVLRMISYMKDNGFTYSEPTQAAENRWTEEVYADFSRTLLA----------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UOX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -95395 for 1446 contacts (-66.0/contact) +
2D Compatibility (PS) -24885 + (NN) -14863 + (LL) 5576
1D Compatibility (HY) -11200 + (ID) 2800
Total energy: -143567.0 ( -99.29 by residue)
QMean score : 0.360
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