Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRIGNCSGFYGDRLSAMREMLTGGELDYLTGDYLAELTMLILGRDRMKNPDRGYAKTFLAQLEDCLGLAHDRGVRIVTNAGGLNPAGLANA-VRALAARLGIPAQVAHVEGDDLQPRAAELGLGTPLTANAYLGAWGIVDCFERGADVVVTGRVTDASVVVGAAAAHFGWGRTDYHRLAGAVVAGHVIECGVQATGGNYAFFTEIGDLTHAGFPLAEIAADGSSVITKHHGTGGLVSVDTITAQLLYEITGARYANPDVTARMDSVELSPDGPDRVRISGVIGEPPPPTYKVSLNSIGGFRNAMTFVLTGLDIDAKADLVRRQLEAAL--TVKPAELQWTLARTDHPDADTEETASALLTCVARDPDPANVGRQFSSAAVELALASYPGFTATAPPGDGQVYGVFTPGYVDAGKVAHIAVHADGTRTEIPCATETLELAPAHPPALPDPLPAGPTRRVPLGLIAGARS------GDKGGSANVGVWVRTDEQWRWLAHTLTVELLKELLPETAGLVVTRHVLPNLRALNFVIEAI---LGQGVAYQARFDPQAKGLGEWLRSRHVEIPETLL |
| 1Y56 Chain:A ((3-492)) | MRP---LDLTEKRGKKVTIYFEGKELEAYEGE--------------------KLPVALLANEIYWLTTSNEGRKRGAFTFGPVPMTVNGVKGLEARRIKVKDGMKIERQGYYDFHEEEIERVVVDVAIIGGGPAGIGAALELQQYLTVALIEE--------------------------RGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKLNENTKIY--LETSALGVFDKGEYFLVPVVRGDKLIEILAKRVVLAT------GAIDSTMLFENNDMPGVFRRDFALEVMNVWEVAPG---RKVAVTGSKADEVIQELERWGIDYVHIPNVKRVEGNEKVERVIDMNNHEYK-VDALIFADGRRPDINPITQAGGKLRFRRGYYSP-----VLDEYHRIKDGIYVAGSAV-SIKPHYANYLEGKLVGAYILKEFGYDAQPCIYEEKLREYEPESLSIPRIPLDKFNLEDVQICGCDVSLKKVDEVIRKGIT--------DLQIIKRL--THLAMGFCQGRYCLFNGAVVVSQRTGKKLSEIDLPVARSPIKNVKMGILAR----------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1Y56.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -70147 for 4208 contacts (-16.7/contact) +
2D Compatibility (PS) -48256 + (NN) 3966 + (LL) 6300
1D Compatibility (HY) -1200 + (ID) 3250
Total energy: -112587.0 ( -26.76 by residue)
QMean score : 0.096
|
|
|