Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSTVTGAAGIGLATLAADGSVLDTWFPAPELTESGTSATSRLAVSDVPVELAALIGRDDDRRTETIAVRTVIGSLDDVAADPYDAYLRLHLLSHRLVAPHGLNAGGLFGVLTNVVWTNHGPCAIDGFEAVRARLRRRGPV-TVYGVDKFPRMVDYVVPTGVRIADADRVRLGAHLAPGTTVMHEGFVNYNAGTLGASMVEGRISAGVVVGDGSDVGGGASIMGTLSGGGTHVISIGKRCLLGANSGLGISLGDDCVVEAGLYVTAGTRVTMPDSNS-----VKARELSGSSNLLFRRNSVSGAVEVLARDGQGIALNEDLHAN |
3R5A Chain:E ((79-332)) | ---------------------------------------------------SALLSRLAESQKPLVA--TLLAE-DAAPSSTAEAYLKLHLLSHRLVKPHAVNLSGIFPLLPNVAWTNIGAVDLAELAELQLEARLKGKLLEVFSVDKFPKMTDYVVPAGVRIADTARVRLGAYIGEGTTVMHEGFVNFNAGTEGPGMIEGRVSAGVFVGKGSDLGGGCSTM-------NIVISVGEGCLIGANAGIGIPLGDRNIVEAGLYITAGTKVALLD--NALVKVVKARDLAGQPDLLF-------AVEC-KT-------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3R5A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -161222 for 1770 contacts (-91.1/contact) +
2D Compatibility (PS) -25194 + (NN) -10911 + (LL) 3556
1D Compatibility (HY) -26000 + (ID) 6450
Total energy: -226221.0 ( -127.81 by residue)
QMean score : 0.456
|
|
|