Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGANHVRNDPIMARLTVITTGGTISTTAGPDGVLRPTHCGATLIAGLDMDSDIEVVDLMALDSSKLTPADWDRIGAAVQEAFRGGADGVVITHGTDTLEETALWLDLTYAGSRPVVLTGAMLSADAPGADGPANLRDALAVAADPAARDLGVLVSFGGRVLQPLGLHKVANPDLCGFAGESLGFTSGGV----------RLTRTKTRPYLGDL-GAAVAPRVDIVAVYPGSDAVAMDACVAAGARAVVLEALGSGNAGAAVIEGVRRHCRDGSDPVVIAVSTRVAGARVGAGYGPGHDLVEAGAVMVPRLPPSQARVLLMAALAANSPVADVIDRWG |
1JSL Chain:B ((83-315)) | ----------------------------------------------------------------------------------RDDVDGVVITHGTDTVEESAYFLHLTVKSDKPVVFVAAMRPATAISADGPMNLLEAVRVAGDKQSRGRGVMVVINDRIGSARYITKTNASTLDTFRANEEGYL--GVIIGNRIYYQNRIDKLHTTRSVFDVRGLTSLPKVDILYGYQDDPEYLYDAAIQHGVKGIVYAGMGAGSVSVRGIAGMRKALEKG---VVVMRST-----RTGNGIVPPDE--ELPGLVSDSLNPAHARILLMLALTRTS---------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1JSL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -141080 for 1790 contacts (-78.8/contact) +
2D Compatibility (PS) -25331 + (NN) -21011 + (LL) 5536
1D Compatibility (HY) -16000 + (ID) 4200
Total energy: -202086.0 ( -112.90 by residue)
QMean score : 0.503
|
|
|