Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRAKAAPVAGPEVAANRAGRQARIVAILSSAQVRSQNELAALLAAEGIEVTQATLSRDLEELGAVKLRGADGGTGIYVVPEDGSPVRGVSGGTDRMARLLGELLVSTDDSGNLAVLRTPPGAAHYLASAIDRAALPQVVGTIAGDDTILVVAREPTTGAQLAGMFENLR
3CAG Chain:F ((4-79))
----------------------------------------------------------------------------------------------DRMARLLGELLVSTDDSGNLAVLRTPPGAAHYLASAIDRAALPQVVGTIAGDDTILVVAREPTTGAQLAGMFENLR
General information:
TITO was launched using:
RESULT:
Template:
3CAG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56235 for 574 contacts (-98.0/contact) +
2D Compatibility (PS) -8362 + (NN) -6054 + (LL) 6028
1D Compatibility (HY) -9600 + (ID) 3800
Total energy: -78023.0 ( -135.93 by residue)
QMean score : 0.744
(partial model without unconserved sides chains):
PDB file :
Tito_3CAG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CAG-query.scw
PDB file :
Tito_Scwrl_3CAG.pdb
: