Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRYPLGEALLALYRWRGPLINAGVGGHGYTYLLGAEANRFVFANADAFSWSQ-TFESLV-----PVDGPTALIVSDGADHRRRRSVVAPGLRHHHVQRYVATMVSNIDTVIDGWQP----GQRLDIYQELRSAVRRSTAESLFGQRLAVHS---DFLGEQLQPLLDLTRRP--PQVMRLQQRVNSPGWRRAMAARKRIDDLIDAQIADARTAP----RPDDHMLTTLISGCSEEGTTLSDNEIRDSIVSLITAGYETTSGALAWAIYALLTVPGTWESAASEVARVLGG-RVPAADDLSALTYLNGVVHETLRLYSPGVISARRVLRDLWFDGHRIRAGRLLIFSAYVTHRLPEIWPEPTEFRPLRWDPNAADYRKPAPHEFIPFSGGLHRCIGAVMATTEMTVILARLVARAMLQLPAQRTHRIRAANFAALRPWPGLTVEIRKSAPAQ |
| 3MDM Chain:A ((12-443)) | ----LQDVFLDWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMSTK-YNKDSKMYRALQTVFGERLFGQGLVSECNYERWHKQRRVIDLAFSRSSLVSLMETFNEKAEQLVEILEAKADGQTPVSMQDMLTYTAMDILAKAAFGMETSMLLGAQKPLSQAVKLMLEGITASRNTLAKFLP--GKRKQLREVRESIRFLRQVGRDWVQRRREALKRGEEVPADILTQILKAE---EGAQDDEGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLGRLQYLSQVLKESLRLYPPAWGTFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGPGAP----KPRFTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRLV--PGQRFGLQEQATLKPLDPVLCTLRPRGW-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MDM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -275190 for 3425 contacts (-80.3/contact) +
2D Compatibility (PS) -43389 + (NN) -11620 + (LL) 1512
1D Compatibility (HY) -26800 + (ID) 4300
Total energy: -359787.0 ( -105.05 by residue)
QMean score : 0.423
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