Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVLSRTSTGRVILVPTQLR---FDRWFLPLAVPLG-------LGPKNSELWVGAGSLHVKMGWAFAADIPLTSITKAEATNA-------RVYAAGVHFGFGRWLVNGSRKGLVALTIDPPEQAKMWKKSMT---VRELWVSVTDPDALVTACTAK------- |
2K5I Chain:A ((1-162)) | MKLSRLVPGVPARIKRLEVSGELHEKLVGMGFVPGEEIEIVQVAPLGDPIVCKIGNRNITLRKREADLIEVEVVGGELPLILADDGTYEITKLNGGRRFLFRMKNLGIESGKKIQVSGRRYYIEGREIDLGYGEATKIWVRRVSDAGEESHPQKLEHHHHHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 2K5I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38841 for 833 contacts (-46.6/contact) +
2D Compatibility (PS) -14760 + (NN) -6951 + (LL) 0
1D Compatibility (HY) 1600 + (ID) 800
Total energy: -59752.0 ( -71.73 by residue)
QMean score : 0.076
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