Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTATASDDEAVTALALSAAKGNGRALEAFIKATQQDVWRFVAYLS-DVGSADDLTQETFLRAIGAIPRFSARSSARTWLLAIARHVVADHIRHVRSRPRTTRGARPEHLIDGDRHARGFEDLVEVTTMIADLTTDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRVARARDALLADAEPDDLTG
4QIC Chain:A ((2-136))
------------------------SLSTRIAPHLPYLRRFARSVTGSQSSGDAYVSAMLEALVADISIFPRASCDRIGTYWLFCHLFDQ--------------------------------EQKTSAKLSYLTPRARQAFLLIAVEGFNEQEASEIMNLDARDFRKLLNQASIDISQ---------
General information:
TITO was launched using:
RESULT:
Template:
4QIC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67837 for 845 contacts (-80.3/contact) +
2D Compatibility (PS) -12978 + (NN) -3837 + (LL) 2920
1D Compatibility (HY) -4400 + (ID) 1050
Total energy: -87182.0 ( -103.17 by residue)
QMean score : 0.440
(partial model without unconserved sides chains):
PDB file :
Tito_4QIC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QIC-query.scw
PDB file :
Tito_Scwrl_4QIC.pdb
: