Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAMVNTTTRLSDDALAFLSERHLAMLTTLRADNSPHVVAVGFTFDPKTHIARVITTGGSQKAVNADRSGLAVLSQV--DGARWLSLEGRAAVNSDID-----AVRDAELRYAQ---------RYRTPRPNPRRVVIEVQIERVLGSADLLDRA
1XXO Chain:A ((5-147))
--------VFDDKLLAVISGNSIGVLATIKHDGRPQLSNVQYHFDPRKLLIQVSIAEPRAKTRNLRRDPRASILVDADDGWSYAVAEGTAQLTPPAAAPDDDTVEALIALYRNIAGEHSDWDDYRQAMVTDRRVLLTLPISHVYGLPPGMR--
General information:
TITO was launched using:
RESULT:
Template:
1XXO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50297 for 921 contacts (-54.6/contact) +
2D Compatibility (PS) -14248 + (NN) -8174 + (LL) 1072
1D Compatibility (HY) -6800 + (ID) 1600
Total energy: -80047.0 ( -86.91 by residue)
QMean score : 0.395
(partial model without unconserved sides chains):
PDB file :
Tito_1XXO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XXO-query.scw
PDB file :
Tito_Scwrl_1XXO.pdb
: