Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTALEVLGGWPVPAAAAAVIGPAGVL-ATHG----------DTARVFALASVTKPLVARAAQVAVEEGVVNLDTPAG---P-----PGSTVRHLLAHTSGLAMHSD------------------------------QALARPGTRRMYSNYGFTVLAESVQRESGIEFGRYLTEAVCEPLGMVTTRLDGG-------------------------------PAAAGFGATSTVADLAVFAGDLLRPSTVSAQMHADATTVQFPGLDGVLPGYGVQRPNDWGLGFEIRNSKSPHWTGECNSTRTFGHFGQS---GGFIWVDPKADLALVVLTARDFGDW-ALDLWPAISDAVLAEYT |
| 1YQS Chain:A ((16-343)) | ---HTALS-QGAPGAMVRVDDNGTIHQLSEGVADRATGRAITTTDRFRVGSVTKSFSAVVLLQLVDEGKLDLDASVNTYLPGLLPDDRITVRQVMSHRSGLYDYTNDMFAQTVPGFESVRNKVFSYQDLITLSLKHGVTNAPGAAYSYSNTNFVVAGMLIEKLTGHSVATEYQNRIFTPLNLTDTFYVHPDTVIPGTHANGYLTPDEAGGALVDSTEQTVSWAQSAGAVISSTQDLDTFFSALMSGQLMSAAQLAQMQQWTTVN-----------STQGYGLGLRRRDLSC--------GISVYGHTGTVQGYYTYAFASKDGKRSVTALANTSNNVNVLNTMARTLESAF----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YQS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -137470 for 2124 contacts (-64.7/contact) +
2D Compatibility (PS) -26161 + (NN) -11124 + (LL) 1036
1D Compatibility (HY) -3200 + (ID) 2700
Total energy: -179619.0 ( -84.57 by residue)
QMean score : 0.410
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