Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSLTLSEASCIASASRWRHIIPAGVVCALIAGIGVGCHGGPSDVVGRAGPDRAHTSITLVAYAVPEPGWSAVIPAFNASEQGRGVQVITSYGASADQSRGVA-DGKPADLVNFSVEPDIARLVKAGKVDK--DW-----DAD------------ATKGIPFG-SVVTFVVRAGNPK-NIRDWDDLLRPGIE--VITPSPLSSGSAKWNLLAPYAAKSDGG--RNNQAGIDFVNTLVNEHVKLRPGSGREATDVFVQGSGDVLISYENEAIATERAGKPVQHVTPPQ-TFKIENPLAVVATSTHLGAATAFRNFQYTVQAQKLWAQ-AGFRPVDPAVAADFADLFPVPAKLWTIADLGGWGSVDPQLFDKATGSITKIYLRATG |
| 4EQB Chain:A ((8-284)) | ------------------------------------------------------SQKLVIYNWGD--YIDPELLTQFTEE-TGIQVQYETFD-SNEAMYTKIKQGGTTYDIAIPSE-YMINKMKDEDLLVPLDYSKIEGIENIGPEFLNQSFDPGNKFSIPYFWGTLGIVYNETMVDEAPEHWDDLWKLEYKNSIMLFDGAREVLG--LGLNSLGYSLNSKDPQQLEETVDKLYKL-TPNIKAI--VADEMKGYMIQNNVAIGVTFSGEASQMLEKNENLRYVVPTEASNLWFDNMVIPKTVKNQDSAYAFINFMLKPENALQNAEYVGYSTPNLPAKELL------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4EQB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -78698 for 1897 contacts (-41.5/contact) +
2D Compatibility (PS) -27627 + (NN) -16743 + (LL) 5240
1D Compatibility (HY) -9200 + (ID) 1700
Total energy: -128728.0 ( -67.86 by residue)
QMean score : 0.401
|
|
|