Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTAFGVEPYGQPKYLEIAGKRMAYIDEG--KGDAIVFQHGNPTSSYLWRNIMPHLEGLGRLVACDLIGMGASDKLSPSGPD-RYSYGEQRDFLFALWDALDLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVTPMTWADWPPAVRGVFQGFRSPQ-GEPMALEHNIFVERVLPGAILRQLSDEEMNHYRRPFVNGGEDRRPTLSWPRNLPIDGEPAEVVALVNEYRSWLEETDMPKLFINAEPGAII-TGRIRDYVRSWPNQTEITV-PGVHFVQEDSPEEIGAAIAQFVRRLRSAAGV |
| 3G9X Chain:A ((12-293)) | -----------PHYVEVLGERMHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAPSHRCIAPDLIGMGKSDK-----PDLDYFFDDHVRYLDAFIEALGL-EEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPFPTWDEWPEFARETFQAFRTADVGRELIIDQNAFIEGALPKCVVRPLTEVEMDHYREPFLK-PVDREPLWRFPNELPIAGEPANIVALVEAYMNWLHQSPVPKLLFWGTPGVLIPPAEAARLAESLPNCKTVDIGPGLHYLQEDNPDLIGSEIARWLPAL------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3G9X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -179198 for 2377 contacts (-75.4/contact) +
2D Compatibility (PS) -28897 + (NN) -7441 + (LL) 404
1D Compatibility (HY) -30400 + (ID) 6550
Total energy: -252082.0 ( -106.05 by residue)
QMean score : 0.503
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