Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSSGNSSLGIIVGIDDSPAAQVAVRWAARDAELRKIPLTLVHAVSPEVATWLEVPLPPGVLRWQQDHGRHLIDDALKVVEQASLRAGPPTVHSEIV-PAAAVPTLVDMS--KDAVLMVVGCLGSGRWPGRLLGSVSSGLLRHAHCPVVIIHDEDSVMPHPQQAPVLVGVDGSSASE-------LATAIAFDEASRRNVDLVALHAWSDVDVSEWPGIDWPATQSMAEQVLAERLAGWQERYPNVAI-TRVVVRDQPARQLVQRS--EEAQLVVVGSRGRGGYAGMLVGSVGETVAQLARTPVIVARESLT |
| 3MT0 Chain:A ((4-278)) | ---MQAIRSILVVIEPDQLEGLALKRAQLIAGVTQSHLHLLVCEKRRD-------------------HSAALNDLAQELRE-----EGYSVSTNQAWKDSLHQTIIAEQQAEGCGLIIKQHFPDNPLKKAILTPDDWKLLRFAPCPVLMTKTARP----WTGGKILAAVDVGNNDGEHRSLHAGIISHAYDIAGLAKATLHVISAHP-----------TFQLSETIEARYREACRTFQAEY-GFSDEQLHIEEGPADVLIPRTAQKLDAVVTVIGTVARTGLSGALIGNTAEVVLDTLESDVLVLKPDD- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3MT0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -166850 for 2002 contacts (-83.3/contact) +
2D Compatibility (PS) -28641 + (NN) -20218 + (LL) 2424
1D Compatibility (HY) -6400 + (ID) 2200
Total energy: -221885.0 ( -110.83 by residue)
QMean score : 0.514
|
|
|