Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRRRLAIVQRWRGQDEIPTDWGRCVLTIGVFDGVHRGHAELIAHAVKAGRARGVPAVLMTFDPHPMEVVYPGS--HPAQLTTLTRRAELVQDLGIEVFLVMPFTTDFMKLTPDRFIHELLVEHLHVVEVVVGENFTFGKKAAGNVDTLRRAGERFGFAVESMSLVSEHHSNETVTFSSTYIRSCVDAGDMVAAMEALGRPHRVEGVVVRGEGRGAELGFPTANVAPPMYSAIPADGVYAAWFTVLGHGPVTGTVVPGERYQAAVSVGTNPTFSGRTRTVEAFVLDTTADLYGQHVALDFVGRIRGQKKFESVRQLVAAMGADTERARDLLSTG |
3OP1 Chain:A ((17-307)) | ------------------GTPSDSVVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNESPKIALEPYHPDLFLHILNPAERERKLKREGVEELYLLDFSSQFASLTAQEFFATYI-KAMNAKIIVAGFDYTFGSDKK-TAEDLKNY---FDGEVIIVPPVEDE----KGKISSTRIRQAILDGNVKEAGKLLGAPLPSRGMVVHGN------GYPTANLVLLDRTYMPADGVYVVDVEIQ-R----------QKYRAMASVGKNVTFD--EARFEVNIFDFNQDIYGETVMVYWLDRIRDMTKFDSVDQLVDQLKADEEVTRNW---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OP1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -200254 for 2205 contacts (-90.8/contact) +
2D Compatibility (PS) -30589 + (NN) -9039 + (LL) 1680
1D Compatibility (HY) -17200 + (ID) 4550
Total energy: -259952.0 ( -117.89 by residue)
QMean score : 0.542
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