Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGRPLHAFEVVATRHLAPHMVRVVLGGSG--FDTFVPSDFTDSYIKLVFVDDDVDVGRLP--RPLT------LDSFADLPTAKRPPVRTMTVRHVDAAAREIAVDIVLHG--------------EHGVAGPWAAGAQRGQPIYLMGPGGAYAPDPAADWHLLAGDESAIPAIAAALEALPP----DAIGRAFIEVAGPDDEIG---LT---A-PDAVEVNWVYRGGRADLVPEDRAGDHAP--LIEAVTTTAWLPGQVHVFIHGEAQAVMHNLRPYVRNERGVDAKWASSISGYWRRGRTEEMFRKWKKELAEAEAGTH |
| 2R6H Chain:A ((6-290)) | --GVKEWECEVLSNKNVSTFIKEFVVKLPEGETMNFKS----GSYAQIKIPKYN-IRYADYDIQDRFRGDWDKMDAWSLTCKNEEETVRAYSMANYPAEGNIITLNVRIATPPFDRAANKWKAGIKPGISSSYIFSLKPGDKVMMSGPYGDFHIQDTDAEMLYIGGGAGMAPLRAQILHLFRTLKTGRKVSYWYGARSKNEIFYEEDFREIEREFPNFKFHIALSDPQPEDNWTGYVG-FIHQVIYDNYLKDHDAPEDIEYYMCGPGP-MANAVKGMLEN-LGVP-RNMLFFDDFG------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2R6H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -113596 for 1962 contacts (-57.9/contact) +
2D Compatibility (PS) -27307 + (NN) -12992 + (LL) 2960
1D Compatibility (HY) -12800 + (ID) 1350
Total energy: -165085.0 ( -84.14 by residue)
QMean score : 0.347
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