Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRARPLTLLTALAAVTLVVVAGCEARVEAEAYSAADRISSRPQARPQPQPVELLLRAITPPRAPAASPNVGFGELPTRVRQATDEAAAMGATLSVAVLDRATGQLVSNGNTQIIATASVAKLFIADDLLLAEAEGKVTLSPE------------------------DHHALDVMLQSSDDGAAERFWSQDGGNAVVTQVARRYGLRSTAPPS--------DGRWWNTISSAPDLIRYYDMLLDGSGGLPLDRAAVIIADLAQSTPTGIDGYPQRFGIPDGLY-AEPVAVKQGWM-CCIGSSWMHLSTGVI-GPER-RYIMVIESLQPADDATARATITQAVRTMFPNGRI |
| 1HZO Chain:A ((4-242)) | ------------------------------------------------------------------------NTIEEQLNTLEKY---SQGRLGVALINTEDNSQITYRGEERFAMASTSKVMAVAAVLKASEKQAGLLDKNITIKKSDLVAYSPITEKHLTTGMTLAELSAATLQYSDNTAMNKILDYLGGPAKVTQFARSINDVTYRLDRKEPELNTAIHGDPRDTTSPIAMAKSLQALTLGD-ALGQSQRQQLVTWLKGN------TTG-DNSIKAGLPKHWVVGDKTGSGDYG-----TTNDIAVIWPENHAPLILVVYFTQQ----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HZO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -93558 for 1655 contacts (-56.5/contact) +
2D Compatibility (PS) -22715 + (NN) -12278 + (LL) 7896
1D Compatibility (HY) -2400 + (ID) 1950
Total energy: -125005.0 ( -75.53 by residue)
QMean score : 0.509
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