Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVRIEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL
2XZW Chain:H ((1-109))
MKKIEAIIRPFKLDEVKIALVNAGIVGMTVSEVRGFGRQKGQTERYRGSEYTVEFLQKLKLEIVVEDAQVDTVIDKIVAAARTGEIGDGKIFVSPVDQTIRIRTGEKNA---
General information:
TITO was launched using:
RESULT:
Template:
2XZW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56782 for 687 contacts (-82.7/contact) +
2D Compatibility (PS) -12129 + (NN) -4145 + (LL) 244
1D Compatibility (HY) -12800 + (ID) 3300
Total energy: -88912.0 ( -129.42 by residue)
QMean score : 0.555
(partial model without unconserved sides chains):
PDB file :
Tito_2XZW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XZW-query.scw
PDB file :
Tito_Scwrl_2XZW.pdb
: