Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MADKSKRPPRFDLKSADGSFGRLVQIGGTTIVVVFAVVLVFYIVTSRDDKKDGVAGPGDAVRVTSSKLVTQPGTSNPKAVVSFYEDFLCPACGIFERGFGPTVSKLVDIGAVAADYTMVAILDSAS------------------------------NQ-HYSSRAAAAAYCVADESIEAFRRFHAALFSKDIQPAELGKDFPDNARLIELAREAGVV-GKVPDCINSGKYIEKVDG---LAAAVNVHATPTVRVNGTEYEWS-TPAALVAKIKEIVGDVPGIDSAAATATS |
3FZ5 Chain:A ((3-199)) | ----------------------------------------------------------------------------AMNPIEFWFDFSSGYAFFAAQ----RIEALAAELGRTVLWRPYMLG----LSSTPLKRDYAQRDWARIARQRGLTFRPPADHPHVALAATRAFYWIEAQSPDAATAFAQRVFD--LYFSDR-LDTASPEAVSRLGPEVGLEPEALLAGIADPALKETVRKIGEDAVARGIFGSPFFLVDDEPFWGWDRMEMMAEWIRT----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FZ5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -110415 for 1178 contacts (-93.7/contact) +
2D Compatibility (PS) -16012 + (NN) -1709 + (LL) 4116
1D Compatibility (HY) -3600 + (ID) 1200
Total energy: -128820.0 ( -109.35 by residue)
QMean score : 0.516
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