Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTARPLSELVERGWAAALEPVADQVAHMGQFLRAEIAAGRRYLPAGSNVLRAFTFPFDNVRVLIVGQDPYPTPGHAVGLSFSVAPDVRPWPRSLANIFDEYTADL-GYPLPSNGDLTPWAQRGVLLLNRVLTVRPSNPASHRGKGWEAVTECAIRALAARAAPLVAILWGRDASTLKPMLAAGNCVAIESPHPSPLSASRGFFGSRPFSRANELLVGMGAEPIDWRLP
2HXM Chain:A ((55-221))
----------------------------------------------------------DVKVVILGQDPYHGPNQAHGLCFSVQRPVPP-PPSLENIYKELSTDIEDFVHPGHGDLSGWAKQGVLLLNAVLTVRAHQANSHKERGWEQFTDAVVSWLNQNSNGLVFLLWGSYAQKKGSAIDRKRHHVLQTAHPSPLSVYRGFFGCRHFSKTNELLQKSGKKPIDWK--
General information:
TITO was launched using:
RESULT:
Template:
2HXM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -79240 for 1286 contacts (-61.6/contact) +
2D Compatibility (PS) -18118 + (NN) -12052 + (LL) 4864
1D Compatibility (HY) -14000 + (ID) 3850
Total energy: -122396.0 ( -95.18 by residue)
QMean score : 0.474
(partial model without unconserved sides chains):
PDB file :
Tito_2HXM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HXM-query.scw
PDB file :
Tito_Scwrl_2HXM.pdb
: