Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTWPAPTAPTPVRATVTVPGSKSQTNRALVLAALAAAQGRGASTISGALRSRDTELMLDALQTLGLRVDGVG-SELTVSGRIE---PGPGARVDCGLAGTVLRFVPPLAALGSVPVTFDGDQQARGRPIAPLLDALRELGVAVDGT----GLPFRVRGNGSLAGGTVAIDASASSQFVSGLLLSAASFTDGLTVQHTGSSLPSAPHIAMTAAMLRQAGVDIDDSTPNRWQVRPGP-VAARRWDIEPDLTNAVAFLSAAVVSGG-TVRITGWPRVSVQPADHILAILRQLNAVVIHADSS---------LEVRGPTGYDGFDVDLRAV---GELTPSVAALAALASPGSVSRLSGIAHLRGHETDRLAALSTEINRLGGTCRETPDGLVITATPL-------R-PGIWRAYADHRMAMAGAIIGLRV-AGVEVDDIAATTKTLPEFPRLWAEMVGPGQGWGYPQPRSGQRARRATGQGSGG |
| 5BUF Chain:A ((16-457)) | --QFSILPGNKAFKGKFTVPGDKSVSHRSIMFGAIA----EGTTHVTGFLEGEDALATLQAFRDMGVSIEGPKNGEVTIHGVGMHGLKAPASALYMGNSGTSMRLLSGMLSAQKFDSVMTGDASLSKRPMERIAKPLRLMGAQIQTTGEKGTPPVSITGGQQLKGIQYDLPMA-SAQVKSGILLAGLWAEGETSVTE------PEPTRDHTERMLRAFGYDVKTEG-NKISLVGGGKLVGTNIQVPSDISSAAFFMVGAAITEGADVVLEAVGINP--TRTGVIEILKQMGADLTVENERIAGGEPIADIHIKGSRTLKGIHMPEDQVPLAIDEFPALFIAAACAE--GQTVLTGAAELRVKESDRIQVMADGLKIMGIDCTPTEDGIIIEGKGKSGDWSPIFAGGEIESHHDHRIAMSFSMAGLRTSGPITIHGTETVATSFPTFTELANRAGLTIEVS--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5BUF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -287832 for 3718 contacts (-77.4/contact) +
2D Compatibility (PS) -44569 + (NN) -23187 + (LL) 196
1D Compatibility (HY) -21600 + (ID) 4800
Total energy: -381792.0 ( -102.69 by residue)
QMean score : 0.527
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