Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTGPEHGSASTIEILPVIGLPEFRPGDDLSAAVAAAAPWLRDGDVVVVTSKVVSKCEGRLVPAPEDPEQRDRLRRKLIEDEAVRVLARKDRTLITENRLGLVQAAAGVDGSNVGRSELALLPVDPDASAATLRAGLRERLGVTVAVVITDTMGRAWRNGQTDAAVGAAGLAVLRNYAGVRDPYGNELVVTEVAVADEIAAAADLVKGKLTATPVAVVRGFGVSDDGSTARQLLRPGANDLFWLGTAEALELGRQQAQLLRRSVRRFSTDPVPGDLVEAAVAEALTAPAPHHTRPTRFVWLQTPAIRARLLDRMKDKWRSDLTSDGLPADAIERRVARGQILYDAPEVVIPMLVPDGAHSYPDAARTDAEHTMFTVAVGAAVQALLVALAVRGLGSCWIGSTIFAA-DLVRDELDLPVDWEPLGAIAIGYADEPSG-LRDPVPAADLLILK |
| 3GB5 Chain:A ((53-250)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RSQEF----YELLNKRRSVRFISSEHVPMEVIENVIKAAGTAPSGAHTEPWTFVVVKDPDMKHKIREIIEEEEEI------------------KEYLDTAPVLILIFKQV-----------------YNEISVSIACGLLLAALQNAGLVTVTTTP--LNCGPRLRVLLGRPSHEKLLVLLPVGYPSRDATVPDLKRKALDQIM-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GB5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -91041 for 1147 contacts (-79.4/contact) +
2D Compatibility (PS) -18023 + (NN) -17334 + (LL) 18068
1D Compatibility (HY) -7200 + (ID) 1900
Total energy: -117430.0 ( -102.38 by residue)
QMean score : 0.503
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