Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGAIMLDGKATRDEIFGDLKQRVAALDA--AGRTPGLGTILVGDDPGSQAYVRGKHADCAKVGITSIRRDLPADISTATLNETIDELNANPDCTGYIVQLPLPKHLDENAALERVDPAKDADGLHPTNLGRLVLGT--PAPLPCTPRGIVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGTR--DLPALTRQADIVVAAVGVAHLLTADMVRPGAAVIDVGVSRTD-D------GLVGDVHPD-VWELAGHVSPNPGGVGPLTRAFLLTNVVELAERR |
| 4CJX Chain:A ((25-315)) | --AVVIDGRAVAKAIQKELTEEVALLERRYKGRRPGLSTIICGKRKDSQTYVRLKRKAAAACGFRNFSVELPANVTQEALEREVIRLNEEEACHSIVVQLPLPPHIDKVAALSKIKPEKDADCLLPVNVGQLHIRERNPAIVPCTASAVMELLRCSGVEICGKRVVVLGRGDIAGLPVATLLAN--EDATVTVVHSATPLCDIADIVRASDIVVSAAGQPGLVRGEWIKLGAAVIDVGTTPVADPSKVPGYRLVGDVCFDVARKRAAYITPVPGGVGPVTVSMLLKNTLTMFKRS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CJX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -185745 for 2412 contacts (-77.0/contact) +
2D Compatibility (PS) -29331 + (NN) -9865 + (LL) 108
1D Compatibility (HY) -24400 + (ID) 5800
Total energy: -255033.0 ( -105.74 by residue)
QMean score : 0.507
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