Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGGVLTLDAAFLGSVPADLGKALLERARADCGPVLHRAIESMREPLATMAGYHLGWWNADRSTAAGSSGKYFRAALVYAAAAACGGDVGDATPVSAAVELVHNFTLLHDDVMDGDAT--RRGRPTVWSVWGVGVAILLGDALHATAVRILTGLTDECVAVRAIRRLQM--------SCLDLCIGQFEDCLLEGQPEVTVDDYLRMAAGKTAALTGCCCALGALVA-NADDATIAALERFGHELGLAFQCVDDLIGIWGDPGVTGKPVGNDLARRKATLPVVAALNSRSEAATELAALYQAPAAMTASDVERATALVKVAGGGHVAQRCADERIQAAIAALPDAVRSPDLIALSQLICRREC |
1RQJ Chain:A ((44-266)) | --------------------------------------------------------------------GKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDR--DRISMISELASASGIAGMCGGQALDLDAEGK-HVPLDALERIHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDL------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RQJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -103781 for 1707 contacts (-60.8/contact) +
2D Compatibility (PS) -22897 + (NN) -14935 + (LL) 10344
1D Compatibility (HY) -9600 + (ID) 3800
Total energy: -144669.0 ( -84.75 by residue)
QMean score : 0.318
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