Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAIDPNSIGAV-TEPMLFEWTDRDTLLYAIGVG--AGTGDLAFTTENSHGIDQQVLPTYAVICCPAFGAAAKVGTFNPAALLHGSQGIRLHAPLPAAGKLSVVTEVADIQDKGEGKNAIVVLRGRGCD-PESGSLVAETLTTLVLRGQGGFGGARGERPAAPEFPDRHPDARIDMPTREDQALIYRLSGDRNPLHSDPWFAT-QLAGFPKPILHGLCTYGVAGRALVAELGGGVAANITSIAARFTKPVFPGETLSTVIWRTEPGRAVFRTEVAGSDGAEAR---VVLDDGAVEYVAG |
| 3KHP Chain:A ((22-310)) | MAIDPN-SIGAVTEPMLFEWTDRDTLLYAIGVGAGTG--DLAFTTENSHGIDQQVLPTYAVICCPAFGAAAKVGTFNPAALLHGSQGIRLHAPLPAAGKLSVVTEVADIQDKGEGKNAIVVLRGRGCDPE-SGSLVAETLTTLVLRGQGGFGGARGERPAAPEFPDRHPDARIDMPTREDQALIYRLSGDRNPLHSDPWFATQL-AGFPKPILHGLCTYGVAGRALVAELGGGVAANITSIAARFTKPVFPGETLSTVIWRTEPGRAVFRTEVAG-------EARVVLDDGAVEYVA- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3KHP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -156111 for 2347 contacts (-66.5/contact) +
2D Compatibility (PS) -29658 + (NN) -14512 + (LL) 176
1D Compatibility (HY) -33200 + (ID) 13500
Total energy: -246805.0 ( -105.16 by residue)
QMean score : 0.498
|
|
|