Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVVGAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQRYVTDWAG-PSALIKSIGLRLGVPWYAYDTVTFSGEVTAVND--GLITVKVVGRNT-LGDHVTATVELSMRDS
1IQ6 Chain:A ((6-134))
-LEVGQKAR-LSKRFGAAEVAAFAALSEDFNPLHLDPAFAATTAFERPIVHGMLLASLFSGLLGQQLPGKGSIYLGQSLSFKLPVFVGDEVTAEVEVTALREDKPIATLTTRIFTQGGALAVTGEAVVKLP--
General information:
TITO was launched using:
RESULT:
Template:
1IQ6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66881 for 918 contacts (-72.9/contact) +
2D Compatibility (PS) -13566 + (NN) -897 + (LL) 208
1D Compatibility (HY) -2800 + (ID) 1150
Total energy: -85086.0 ( -92.69 by residue)
QMean score : 0.300
(partial model without unconserved sides chains):
PDB file :
Tito_1IQ6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IQ6-query.scw
PDB file :
Tito_Scwrl_1IQ6.pdb
: