Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLAEAADAINFGLAGRVVLVTGGVRGVGAGISSVFAEQGATVITCARRAVD-----------GQPYEFHRCDIRDEDSVKRLVGEIGER-HGRLDMLVNNAGGSPYALAAEATHNFHRKIVELNVLAPLLVSQHANVLMQAQPNGGSIVNICSVSGRRPTPGTAAYGAAKAGLENLTTTLAVEWAP-KVRVNAVVVGMVETERSELFYGD---AESIARVAATVPLGRLARPADIGWAAAFLASDAASYISGATLEVHGGGEPPPYLGASSANK |
| 1IPE Chain:B ((4-252)) | -----------WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERG-NVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGG-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IPE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -133224 for 1963 contacts (-67.9/contact) +
2D Compatibility (PS) -25483 + (NN) -8912 + (LL) 816
1D Compatibility (HY) -16400 + (ID) 4250
Total energy: -187453.0 ( -95.49 by residue)
QMean score : 0.537
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