Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNLSVAPKEIAGHGLLDGKVVVVTAAAGTGIGSATARRALAEGADVVISDHHERRLGETAAELSALGLGRVEHVVCDVTSTAQVDALIDSTTARMGRLDVLVNNAGLGGQTPVADMTDDE----WDRVLDVSLTSVFRATRAALRYFRDAPHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAAEYGVRINAVSPSIARHKFLDK--TASAELLDRLAAGEAFGRAAEPWEVAATIAFLASDYSSYLTGEVISVSCQHP |
4WEC Chain:C ((28-266)) | ---------------LAGKVAVITGGA-SGIGLATGRRLRAEGATVVVGDIDPTTGKAAADELEGL------FVPVDVSEQEAVDNLFDTAASTFGRVDIAFNNAGI--SPPEDDLIENTDLPAWQRVQDINLKSVYLSCRAALRHMVPAGKGSIINTASFVAVMGSATSQISYTASKGGVLAMSRELGVQYARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLVHIPLGRFAEPEELAAAVAFLASDDASFITGSTFLV----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WEC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -121178 for 2021 contacts (-60.0/contact) +
2D Compatibility (PS) -25552 + (NN) -7575 + (LL) 628
1D Compatibility (HY) -13600 + (ID) 4650
Total energy: -171927.0 ( -85.07 by residue)
QMean score : 0.522
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