Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEQQWNFAGIEAAASAIQGNVTSIHSLLDEGKQSLTKLAAAWGGSGSEAYQGVQQKWDATATELNNALQNLARTISEAGQAMASTEGNVTGMFA-----
1WA8 Chain:A ((1-99))
-AEMKTDAATLAQEAGNFERISGDLKTQIDQVESTAGSLQGQWRGAAGTAAQAAVVRFQEAANKQKQELDEISTNIRQAGVQYSRADEEQQQALSSQMGF
General information:
TITO was launched using:
RESULT:
Template:
1WA8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12744 for 534 contacts (-23.9/contact) +
2D Compatibility (PS) -10161 + (NN) -2755 + (LL) 208
1D Compatibility (HY) -800 + (ID) 700
Total energy: -26952.0 ( -50.47 by residue)
QMean score : 0.392
(partial model without unconserved sides chains):
PDB file :
Tito_1WA8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WA8-query.scw
PDB file :
Tito_Scwrl_1WA8.pdb
: