Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDSEKSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVVPNLN
2FCH Chain:F ((5-99))
---------IHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRSIPTLLLFKNGEVAATKVGALSKGQL------------
General information:
TITO was launched using:
RESULT:
Template:
2FCH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -68552 for 659 contacts (-104.0/contact) +
2D Compatibility (PS) -9908 + (NN) -1141 + (LL) 1204
1D Compatibility (HY) -11200 + (ID) 2700
Total energy: -92297.0 ( -140.06 by residue)
QMean score : 0.660
(partial model without unconserved sides chains):
PDB file :
Tito_2FCH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FCH-query.scw
PDB file :
Tito_Scwrl_2FCH.pdb
: