Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHRLLSDRARGWRRALCGIVLGLLAWSAHGVPAKAPQDLRIDGEVLPGRSIDLLEQALSRVKFNTDPQQLRRGLVENRLLARAVEDQLTAQSRADLDASVEIEAGNLLEQVYGRRYREDLGPYLRQPRALSAERLREVLAPRSRGLVENSLLLDETQRREAAGVELIGWQFPGQPAQVLDLLSLYEGDNVQGQVELQQGNLAYLARQVQTRIRRDYLWYRLARDGFGPAERQGVRTLVRDKLVRHRYLHQIGLYSDFHHESDALRELAGKVSDKDAEAYYRRNLERYRNVAQVQAAHIRLADQ------------ASADKVYAELRGGLAFDEAVRRYSLADDRDRDPPGDLGLIRPQDGRLDLLRKTALIQKADTVSQPMRIDGAFEIVRVRSREDRQLPLDDRSVRFEVNQAVAREQLAAQFETRLRNLLAGARVEGL |
| 2PV1 Chain:A ((2-103)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ELNLSHILIPLPENPTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQ--QALNGGQMGWGRIQELPGIF-AQALSTAKKGDIVGPIRSGVGFHILKVNDLR-------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PV1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -18488 for 656 contacts (-28.2/contact) +
2D Compatibility (PS) -9752 + (NN) -8152 + (LL) 25612
1D Compatibility (HY) -2000 + (ID) 850
Total energy: -13630.0 ( -20.78 by residue)
QMean score : 0.336
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