Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGERLMPLSLDLLRVFESAARQLSFTAAAEELGTTQPAVSQQIKRLEKELATPLFQRVHRGIVLTDAGQLLLRHVAAGLETIDAGIAALGARQRHEVLQVATDYAFAAYWLMPRLPRFHQAHPHLDVSLVTSERGLAGQRGDIDVAILFGDGRSKHGEAHRLFREEVFPVCSPRLVEGLQLPLAKAHLARLPMLHLKPAQHARWFDWPALFEALAIDR-QPIPAVLSFDNYTLLIQAAIAGQGVAIGWRHLVDGLLEQGLLCRPIGESCLSRYGYYAVLPERKRRQRLVDGFVDWLQAELQAGGA |
3MZ1 Chain:A ((85-293)) | --------------------------------------------------------------------------------------------LPKGRLRVETASAFANLVIIPALPEFHKKYPDIQIDLGVSDRT-YL-AENVDCAIRAGTLTDQSLIARRITEMKFVACASRDFLERHPVPQHPSDLEKNCYVVGYFL-PK--QQMPFHFRRGNEEIEVSGRYTMAANESTTYLAAARAGLGVIQAPLFMVREDLRNGTMVPVLPDWQVEPMPIYLVYPPNRHLSSRLRVFADWVVKVMAQSQN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MZ1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -133245 for 1584 contacts (-84.1/contact) +
2D Compatibility (PS) -21078 + (NN) 1511 + (LL) 8904
1D Compatibility (HY) -8000 + (ID) 2150
Total energy: -154058.0 ( -97.26 by residue)
QMean score : 0.451
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