Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSHSAKKALLPLLAVATLAGLAGCATETSTALPVQQVESVNRPYSGVRSPIAVGKFDNRSSYMRGIFSDGVDRLGGQAKTI-LITHLQQTNRFNVLDRDNMSEIQQEAAIKGQAQR-------------LKGADYV-VTGDVTEFGRKEV---GDRQLFGILGRGKSQIAYAKVALNIVNISTSEVVYSTQGAGEYALSNRE--VIGFGGTASYDSTLNG-KVL-DLAMREAVNKLVNAVDSGAWKPQNQ---------------- |
| 4UV2 Chain:A ((18-257)) | --AQSYKDLTHL------------------------------PAPTGKIFVSVYNIQDETGQFKPYPASNFSTAVPQSATAMLVTALKDSRWFIPLERQGLQNLLNERKIIRAAQENGTVAINNRIPLQSLTAANIMVEGSIIGYESNVKSGGVGARYFGIGADTQYQLDQIAVNLRVVNVSTGEILSSVNTSKTILSYEVQAGVFRFIDYVGYTSNEPVMLCLMSAIETGVIFLINDGIDRGLWDLQNKAERQNDILVKYRHMSV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UV2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -16830 for 1398 contacts (-12.0/contact) +
2D Compatibility (PS) -21142 + (NN) -11977 + (LL) 2708
1D Compatibility (HY) -9200 + (ID) 2100
Total energy: -58541.0 ( -41.87 by residue)
QMean score : 0.337
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