Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNHCFANGNKRTAAAAATVFLLLNGIELTGPAQDFVDIMVALVTREASVQDLEDWMFYWHRPFDAYNLPDSDAFERMVARLGIG
1J7R Chain:A ((8-84))
------LGPEEKDECMKIFDIFDRNAENIAPVSDTMDMLTKL-GQTYTKRETEAIMKEARGPKGDKKNIGPEEWLTLCSKWVRQ
General information:
TITO was launched using:
RESULT:
Template:
1J7R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28498 for 515 contacts (-55.3/contact) +
2D Compatibility (PS) -8418 + (NN) -5340 + (LL) 696
1D Compatibility (HY) 800 + (ID) 450
Total energy: -41210.0 ( -80.02 by residue)
QMean score : 0.386
(partial model without unconserved sides chains):
PDB file :
Tito_1J7R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1J7R-query.scw
PDB file :
Tito_Scwrl_1J7R.pdb
: