Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQKLIVALFGLLLAACSSSPPETPPTRVVIWLHAAPNLNPSAAGQAAPLRLRLYELKKDTAFGRADYFALTDNAQSTLGGDLVEQDEFLLRPGE-ERRIERTLDEQTRQLGFVAAYRDLDRATWRQVLDVPGQRTS-HLDITLGAQAIGIVARPAP |
| 2WQ4 Chain:A ((2-135)) | ---------PLLSASIVSAPVVTSETYVDIPGLYLDVAKAGIRDGKLQVILNVPTPYATGNNFPGIYFAIATNQGVVADGCFTYSSKVPESTGRMPFTLVATID--------VGSGVTFVKGQWKSV-----RGSAMHIDSYASLSAIWGTAAPSS |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2WQ4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 1937 for 966 contacts (2.0/contact) +
2D Compatibility (PS) -12971 + (NN) 2790 + (LL) 2028
1D Compatibility (HY) -1600 + (ID) 1350
Total energy: -9166.0 ( -9.49 by residue)
QMean score : 0.105
|
|
|