Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVEIHLPGATTALPARLDGVVIGVLLDVPDAA-APVVAYPGCPSEHGLAAATTTQLSR---ADIGAQVALMFVAGDPRQPLLIGRIQRLPQEALAQLDGERLEFSAEREIVLRCGKASITLTRAGKVIIRGAYLSSRSTGVNRIKGGSVQIN
1FR3 Chain:A ((7-62))
-------------------NKLEATVKEIVKGTVMAKIVMDYK--GTELVAAITIDSVADLDLVPGDKVTALVKATEMEVLK-----------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1FR3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27705 for 277 contacts (-100.0/contact) +
2D Compatibility (PS) -5342 + (NN) 1486 + (LL) 6180
1D Compatibility (HY) 400 + (ID) 350
Total energy: -25331.0 ( -91.45 by residue)
QMean score : 0.155
(partial model without unconserved sides chains):
PDB file :
Tito_1FR3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FR3-query.scw
PDB file :
Tito_Scwrl_1FR3.pdb
: