Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQALSIVASGMVSAVGLSAPASCAAIRCALDNFQETRF-IDQG--GEWLLAASVPL------------EQPWRGRAKLLKMAARAIDEALRGQPDLD----CTELPLLLCVAEGDRPG-------------RCAGLDESFLRDLEGELGRRFHPSSALIARGRVGGAVALLNARKLI-QGGCRQVLVAGVDSFVSGPTLAAYEARERLLT-------SQNSNGFIPGEGAAAVLVAAPLH-EEAPQLLCIGLGFGVEKATVESEDLPLRADGLSQAVRAALAEAGCGLEQMDYRLTDISGEQYYFKEASLTLSRNLRVLK-PKFDLWHPADCIGECGAAIGPALLAVALAASRKGYGDG------------------------------PNVFCHLGNDAGERAAALLSYRRVRAA |
| 2VZ8 Chain:A ((2-408)) | --EEVVIAGMSGKLPESENLEEFWANLIGGVDMVTADDRRWKAGLYGLPRRMGKLKDLSRFDASFFGVHSKQANTMDPQLRMLLEVTYEAIVDGGINPASLRGTSTGVWVGVSSSDASEALSRDPETLVGYSMIGCQRAMMANRLSFFFDFK--GPSITIDTACSSSLLALQSAYQAIRGGECSAAVVGGLNVLLKPNSSLQFMKLGMLSQDGTCRSFDAEGTGYCRAEAVVAVLLTKKSLAR-RVYATILNAGTNTDGSKEQGV-TFPSGDVQEQLIRSLYAPAGPDPESLEYIEAHGTGTKVGDPQELNGIVNALCATRREPLLIGSTKSNMGHPEPASGVAALIKVLLSLEHGVWAPNLHYHTPNPEIPALQDGRLQVVDRPLPIRGGNVGINSFGFGGSNVHVILQPNSRPAP |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VZ8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -189078 for 3078 contacts (-61.4/contact) +
2D Compatibility (PS) -35269 + (NN) -7569 + (LL) 384
1D Compatibility (HY) 0 + (ID) 2550
Total energy: -234082.0 ( -76.05 by residue)
QMean score : 0.419
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