Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRLPANLGRLLPALCLGVLLSACSTFGQRDPLRIDLVGLEPLPGQGMEMRFMVKLRVQNPNDEPIEYNGIALDLDVNGQPLASGVSDQTGEVPRFGERVVSVPLTVSAFSAFRQAWGLSNNAPTQGMPYVVKGKLAGGLFGTVRFSEKGTLDFSGPAVGAPKTKGL |
2JMS Chain:A ((1-63)) | ----------------------------------------------------------------------------------------TDPEEHFD------PNTNCDYTNSQDAWDYCTN-------YIVNSS-CGEICCNDCFDETGTGACRAQAFGNSCLNW- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JMS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3402 for 460 contacts (7.4/contact) +
2D Compatibility (PS) -6391 + (NN) 246 + (LL) 5872
1D Compatibility (HY) -2400 + (ID) 800
Total energy: -71.0 ( -0.15 by residue)
QMean score : -0.041
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