Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRLPANLGRLLPALCLGVLLSACSTFGQRDPLRIDLVGLEPLPGQGMEMRFMVKLRVQNPNDEPIEYNGIALDLDVNGQPLASGVSDQTGEVPRFGERVVSVPLTVSAFSAFRQAWGLSNNAPTQGMPYVVKGKLAGGLFGTVRFSEKGTLDFSGPAVGAPKTKGL
2JMS Chain:A ((1-63))----------------------------------------------------------------------------------------TDPEEHFD------PNTNCDYTNSQDAWDYCTN-------YIVNSS-CGEICCNDCFDETGTGACRAQAFGNSCLNW-


General information:
TITO was launched using:
RESULT:

Template: 2JMS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3402 for 460 contacts (7.4/contact) +
2D Compatibility (PS) -6391 + (NN) 246 + (LL) 5872
1D Compatibility (HY) -2400 + (ID) 800
Total energy: -71.0 ( -0.15 by residue)
QMean score : -0.041

(partial model without unconserved sides chains):
PDB file : Tito_2JMS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2JMS-query.scw
PDB file : Tito_Scwrl_2JMS.pdb: