Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTLPPCPQCNSE-Y---------TYED------G-ALLVCPECAHEWSPNEAATASDDGKVIKDSVGNVLQDGDTITVIKDLKVKGSSLVVKVGTKVKNIRLVDGDHDIDCKIDGIGAMKLKSEFVRKV
3GA8 Chain:A ((3-51))
----MKCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRASVNAE-----------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3GA8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7354 for 139 contacts (-52.9/contact) +
2D Compatibility (PS) -3644 + (NN) -2677 + (LL) 3316
1D Compatibility (HY) -3200 + (ID) 450
Total energy: -14009.0 ( -100.78 by residue)
QMean score : 0.507
(partial model without unconserved sides chains):
PDB file :
Tito_3GA8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GA8-query.scw
PDB file :
Tito_Scwrl_3GA8.pdb
: