Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPADGEAARRADLLKAFLAQRQRMESLVSRWVGCRATAADLVQELFLRFWRRPAA--PVEELGSYLLRSARNLAIDHLRGEGSRQRQLDDWLPEQRQGEPVGPEQALEAGDQWRRVEAALRGLPERTRRIFLLNRIHGRTYAEIAQAMQLSQSAVEKHMMRALDACKASLAGPAGEQARSAQP
1H3L Chain:A ((28-102))
----STAERSARFERDALEFLDQMYSAALRMTRNPADAEDLVQETYAKAYASFHQFREGTNLKAWLYRILTNTFINSYR--------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1H3L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47316 for 463 contacts (-102.2/contact) +
2D Compatibility (PS) -8467 + (NN) -8011 + (LL) 7528
1D Compatibility (HY) -1200 + (ID) 1000
Total energy: -58466.0 ( -126.28 by residue)
QMean score : 0.707
(partial model without unconserved sides chains):
PDB file :
Tito_1H3L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1H3L-query.scw
PDB file :
Tito_Scwrl_1H3L.pdb
: