Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSHPSHVRALCASLCLGAGLPVHAGHVHAGQGFLEDAKASLTARNFHLHRNFVGDASQGKAEEWTQSFILDARSGFTQGSVG-FGLDVLGLYSLKLD--GGKGTAGTQLLPIHDDGRPADDFGRLA-VAGKLRVSNSELKIGEWMPVLPILRSDDGRSLPQTFRGGQLSANEIAGLTLYAGQFRGNSPRNDASMQDMSLFGRPAATSDRFDFAGGEYRFNGERSLLGLWNAELKDIYRQQYLQLQHSQPLGD-WLLGANLGGFRGRDAGSARAGKLDNRTVSALFSARYGLHTLYLGLQKVSGDDGWM-----RVNGTSGGTLANDSYNASYDNPGERSWQLRYDFDFVGLGLPGLTFMTRYLHGDHVRLAG------------VTDDGSEWGRESELGYTLQSGAFKRLNVRWRNSSQRRDW-GSNTRFDENRLIVSYPLSLL |
| 3SY7 Chain:A ((2-420)) | ---------------------AFVSDQAEAKGFIEDSSLDLLLRNYYFNRD--------DRVDWTQGFLTTYESGFTQ---GTVGFGVDAFGYLGLKLDGT------------------DDYSRAGGA-VKVRISKTMLKWGEMQPTAPVFAAGGSRLFPQTATGVQLQSSEFEGLDLEAGHFTE----------ELYATY-AGETAKSADFIGGRYAITDNL-SASLYGAELEDIYRQYYLNSNYTIPLASDQSLGFDFNIYRTNDEGKAKAGDISNTTWSLAAAYTLDAHTFTLAYQKVHGDQPFDYIGFG-GAGGDSIFLANSVQYSDFNGPGEKSWQARYDLNLASYGVPGLTFMVRYINGKDIDGTKMSDNNVGYKNYGYGEDGKHHETNLEAKYVVQSGPAKDLSFRIRQAWHRANADQGEGDQNEFRLIVDYPLSIL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SY7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 13658 for 2815 contacts (4.9/contact) +
2D Compatibility (PS) -36329 + (NN) 2074 + (LL) 2044
1D Compatibility (HY) -17600 + (ID) 6600
Total energy: -42753.0 ( -15.19 by residue)
QMean score : ?
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