Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVAITHTPKLKHLDKLLAHCHRRRYTAKSTIIYAGDRCETLFFIIKGSVTILIEDDDGREMIIGYLNSGDFFGELGLFEKEGSEQERSAWVRAKVECEVAEISYAKFRELSQQDSEILYTLGSQMADRLRKTTRKVGDLAFLDVTGRVARTLLDLCQQPDAMTHPDGMQIKITRQEIGRIVGCSREMVGRVLKSLEEQGLVHVKGKTMVVFGTR
1RUN Chain:B ((11-205))
------------LEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFE-EG--QERSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLEDQNLISAHGKTIVV----
General information:
TITO was launched using:
RESULT:
Template:
1RUN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -134778 for 1394 contacts (-96.7/contact) +
2D Compatibility (PS) -20193 + (NN) 2129 + (LL) 1356
1D Compatibility (HY) -24000 + (ID) 6600
Total energy: -182086.0 ( -130.62 by residue)
QMean score : 0.523
(partial model without unconserved sides chains):
PDB file :
Tito_1RUN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RUN-query.scw
PDB file :
Tito_Scwrl_1RUN.pdb
: