Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MSRSAFTALLLSCVLLALSMPARADDLPYRFGLG-KADITGEAAEVGMMGYSSLEQKTAGIHMRQWARAFVIEEAASGRRLVYVNTDL--GMIFQAVHLKVLARLKAKYPGVYDEN---NVML--AATHTHSGPGGFSHYAMYNLSVLGFQEKTFNAIVDGIVRSIERAQARLQPGRLFYGSGELRNANRNRSLLSHLKNPDIVGYEDGIDPQMSVLSFVDANGELAGAI--SWFPVHST----SMTNANHLISPDN--KGYASYHWEHDVSRKSGFVAAFA---------QTNAGNLSP---NLNLKPGSGPFDNEFDNTREIGLRQFAKAYEIAGQAQEEVLGELDSRFRFVDFTRLPIRPEFTDGQPRQLCT-----------AAIGTSLAAGS----TEDGPGP----------LGLEEGNNPFLS---------------ALGGLLTGVPPQELVQCQAEKTILADTGNKKPYPWTPTVLPIQ-MFRIGQLELLGAPAEFTVMAGV------------------------RIRRAVQAASEAAG----------------------IRHVVFNG-----YANAYASYV---------------TTREEYAAQEYEGGSTLYGPWTQAAYQQLFVDM-AVALRERLPVETSAIAPDLSCCQMN-FQTGV---VADDPYIGKSFGDVLQQPRESYRIG------------DKVTVAFVTGHPKNDLRTEKTFLEVVNIGKDGKQTPETVATDNDWDTQYRWERVGISASKATISWSIPPGTEPGHYY-----------IRHYG------NAKNFWTQKIS-----------------------EIGGSTRSFEVLGTTP--- |
| 4IIB Chain:A ((3-841)) | LAFSPPFYPSPWANGQGEWAEAYQRAVAIVSQMTLDEKVNLTTGTG----WELEKCVGQTGGV-PRLNIGGMCLQDSPLGIRDSDYNSAFPAGVNVAATWDKNLAYLRGQAMGQEFSDKGIDVQLGPAAGPLGRSPDGGRNWEGFSPD-PALTGVLFAETIKGIQDAGVVATAKHY---ILNEQEHFRQVAEAAGYGFNISDTISSNVDDKTIHEMYLWPFADAVRAGVGAIMCSYNQINNSYGCQNSYTLNKLLKAELGFQGFVMSDWG---AHHSGVGSALAGLDMSMPGDITFDSATSFWGTNLTIAVLNGTVPQW--RVDDMAVRIMA-AYYKVGRDR------LYQPPNFSSWTRDEYGFKYFYPQEGPYEKVNHFVNVQRNHSEVIRKLGADSTVLLKNNNALPLTGKERKVAILGEDAGSNSYGANGCSDRGCDNGTLAMAWGSGTAEFPYLVTPEQAIQAEVLKHKG---------SVYAITDNWALSQVETLAKQASVSLVFVNSDAGEGYISVDGNEGDRNNLTLWKNGDNLIKAAANNCNNTIVVIHSVGPVLVDEWYDHPNVTAILWAGLPGQESGNSLADVLYGRVNPGAKSPFTWGKTREAYGDYLVRELNNGNGAPQDDFSEGVFIDYRGFDKRNETPIYEFGHGLSYTTFNYSGLHIQVLNAVATETGAAPTFGQVGNASDYVYPEGLTRISKFIYPWLNSTDLKASSGDPYYGVDTAEHVPEGAT---DGSPQPVLPAGGGSGGNPRLYDELIRVSVTVKNTGRVAGDAVPQLYVSLGGPNEPKVVLRKFDRLTLKPSEETVWTTTLTRRDLSNWDVAAQDWVITSYPKKVHVGSSSRQLPLHAALPKVQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IIB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14462 for 5197 contacts (-2.8/contact) +
2D Compatibility (PS) -65946 + (NN) -3804 + (LL) 1168
1D Compatibility (HY) -14000 + (ID) 6050
Total energy: -103094.0 ( -19.84 by residue)
QMean score : 0.208
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