Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLKGKTALVTGSTSGIGLGIALSLAEAGADLLLNGFG---EVDAALAQVRAR-GVRAEHHPADLSSPEQIGELMAFAERTFGGVDILVNNAGIQYVAPVQEFPTERWDAIIAINLSSVFHTTRLALPGMLARGWGRIVNIASTHGLVASAGKSAYVAAKHGVLGLTKSVALETARTPVTCNAICPGWVLTPLVQKQIDARTAE-GVSPEQAEHDLLAEKQPSLAFVTPEQLGGLTLFLCSEAADQVRGAAWNMDGGWVAQ
2YZ7 Chain:H ((2-260))
--LKGKKAVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLESKFGVKAYYLNADLSDAQATRDFIAKAAEALGGLDILVNNAGIQHTAPIEEFPVDKWNAIIALNLSAVFHGTAAALPIMQKQGWGRIINIASAHGLVASVNKSAYVAAKHGVVGLTKVTALENAGKGITCNAICPGWVRTPLVEKQIEAISQQKGIDIEAAARELLAEKQPSLQFVTPEQLGGAAVFLSSAAADQMTGTTLSLDGGWTAR
General information:
TITO was launched using:
RESULT:
Template:
2YZ7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -155883 for 2134 contacts (-73.0/contact) +
2D Compatibility (PS) -27414 + (NN) -9583 + (LL) 260
1D Compatibility (HY) -22400 + (ID) 7700
Total energy: -222720.0 ( -104.37 by residue)
QMean score : 0.537
(partial model without unconserved sides chains):
PDB file :
Tito_2YZ7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2YZ7-query.scw
PDB file :
Tito_Scwrl_2YZ7.pdb
: