Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLVAIHGLIHRLGLYGEHLEGALVNDSEALYAHPATYYRREDLLPAFESNEALRERFFGGVKKPIFTSANAHNHLVGLAEVLAMYLLVWSPAPWRLVRLEPPPGLDARHAQRFAGE---RRHIEAF-RDGLPRVARALAHISSLMIFDDHDITDDWNLSARWELTAYGHPFSR--------RIIG-------NALLAYLLCQGWGNDPQHCGEWLAPVAALMEGAA--ADGRLPCAEQDRLLDALLDFQHWHYRLPGSPTLIVLDTRTRRWRSERNLGRPSGLMDWEALSEFQQDLLGEKAAIIVSP------------APMFGVKLIEGVQKL-------FSWIGQPLLVDAENWMAHRGAASVMM------NIFRHSRTPGNYLILSGDVHYSFVYDIRIRHRERGPRLWQITSSGIK------NEFPRRLLDWFDRLNRWLYAPWSPLNWLTQRRSLEIRPRV--PQHSQAGERLWNSAGIGQVFIGEDGRPRAVLQVNADGSPATAFERHRDVEDERADQSPVAPGR |
| 4GA6 Chain:A ((1-493)) | MKAKIRILDMFSGRY-----TVLINEEDAKEAK----LHPDDLVKIEAGKK--------AVYGSVALSNLVGKGEVGISRDVL-DLHNFSEGETVSVIPAGTPESVRYIKKKMHGEKLRKVEIEAIVRDIVDRKLRDIEISSFVTALEINGLDMDEIAALTIAMAETGDMLDIDRKPIMDVHSIGGVPGNKTNILVVPIVAAAGLTIPKTSSRAITSAAGTADVVEVFADVSFSLDEIKRIVEKVGACLVW----GGALNLAPADDITIKAERALSID-PTGLMLASIMSK--KYAMGSQYVLIDIPTGKGVKVETVEEARSLARDFIELGKRLGQYVEVAITYGGQPIGHTVGPALEAREALSALMTGKGPGSLIEKATGLAGILLEMGGVAPAGTGKKMAKEILESGKAWEKMKEIIEAQGGDPNIKPEEIPIG-DKTYTFTAATSGYVTAIDNRAITAIARAAGAPEDKGAGIELYVKVG-EKV---KEGDPLFTIHAEHEARLDQAIVLARRTE-------PIRIE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GA6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78713 for 3728 contacts (-21.1/contact) +
2D Compatibility (PS) -46895 + (NN) -9952 + (LL) 2980
1D Compatibility (HY) -2400 + (ID) 4400
Total energy: -139380.0 ( -37.39 by residue)
QMean score : 0.208
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