Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------------MKHGCFTICRKFSLALAILALAGCSYFFAPRVELQRLTLDVAARANDDSPIAVDFVAVKDAELFKELAGLPASQWFANREQYRRDYRQQFAVWSLELVPGQFIESESFPLRGDRATGL-LVFAGYNTPGAHRLRLDQQQRVWLRLDTREMR-LVNDPATR
2F1L Chain:A ((19-187))
DLVVIGKIVSVYGIRGEVKVYSFTDPLDNLLDYR--RWTLRRDGEIRQAELVRGRLHG--KVLAAKLKGLDDREEARTFTGY---EICIPRSELPSYYWHQLEGLKVIDQGRQLL-GVIDHLLETGANDVMVVKPCAGSLDDRERLLPYTGQCVLSIDLAAGEMRVDWDADF
General information:
TITO was launched using:
RESULT:
Template:
2F1L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87349 for 997 contacts (-87.6/contact) +
2D Compatibility (PS) -15170 + (NN) -564 + (LL) -188
1D Compatibility (HY) -4800 + (ID) 1000
Total energy: -109071.0 ( -109.40 by residue)
QMean score : 0.368
(partial model without unconserved sides chains):
PDB file :
Tito_2F1L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2F1L-query.scw
PDB file :
Tito_Scwrl_2F1L.pdb
: