Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQIRADFDSGNIQVIDASDPRRIRLAIRPDLASQHFQWFHFKVEGMAPATEHCFTLVNAGQSAYSHAWSGYQAVASYDGERWFRVPSQYDADGLHFQLEPEESEVRFAYFEPYSRERHARLVERALG-IE-GVERLAVGTSVQGRDIELLRVRRHPDSHLKLWVIAQQHPGEHMAEWFMEGLIERLQRP--DDTEMQRLLEKADLYLVPNMNPDGAFHGNL--------R------TNAAGQDLNRAWLE------------------PSAERSPEVWFVQQEMKRH-GVDLFLDIHGDEEI-PHVFAAGCEGNPGYTPRLERLEQRFREELMARGEFQIRHGYPRSAPG---QANLALACNFVGQTYDCLAFTIEMPFKDHDDNPEPGTGWSGARSKRLGQDVLSTLAVLVDELR |
| 1DTD Chain:A ((1-299)) | ----------------------------------------------------------------------------------------------------------FNFGAYHTLEEISQEMDNLVAEHPGLVSKVNIGSSFENRPMNVLKFSTG-GDKPAIWLDAGIHAREWVTQATALWTANKIVSDYGKDPSITSILDALDIFLLPVTNPDGYVFSQTKNRMWRKTRSKVSAGSLCVGVDPNRNWDAGFGGPGASSNPCSDSYHGPSANSEVEVKSIVDFIKSHGKVKAFIILHSYSQLLMFPYGYKCTKLDDF-DELSEVAQKAAQSLSRLH----GTKYKVGPICSVIYQASGGSIDWSYDYGIKYSFAFELRDTG-----RYGFLLPARQILPTAEETWLGLKAIMEHVR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DTD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -101543 for 2156 contacts (-47.1/contact) +
2D Compatibility (PS) -28103 + (NN) -13133 + (LL) 7280
1D Compatibility (HY) -9200 + (ID) 2300
Total energy: -146999.0 ( -68.18 by residue)
QMean score : 0.526
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