Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDKKTQTRARILGAATQALLERGAVEPSVGEVMGAAGLTVGGFYAHFQSKDALMLEAFEQLLGKRRELLGELDPGLSGKERRALAAAFYLSRKHRDAQVDAGCPLPATLAEVARLPEGFREVLSRHVEIMVTSLAESPEETDVALADLVLMIGGLALARALGPGELSDRVLRAAKQAVN
3G7R Chain:B ((34-89))
-----SEARARLLGTATRIFYAEGIHSVGIDRITAEAQVTRATLYRHFSGKDDLILAYLDQ-----------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3G7R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31259 for 380 contacts (-82.3/contact) +
2D Compatibility (PS) -6054 + (NN) -2480 + (LL) 9304
1D Compatibility (HY) -4400 + (ID) 900
Total energy: -35789.0 ( -94.18 by residue)
QMean score : 0.526
(partial model without unconserved sides chains):
PDB file :
Tito_3G7R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3G7R-query.scw
PDB file :
Tito_Scwrl_3G7R.pdb
: